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AFB Rapid culture by MGIT - Body Fluid

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MGIT culture for TB detection in pleural, peritoneal, or CSF fluid.

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AFB Rapid Culture by MGIT - Body Fluid

  • Why is it done?
    • Detects and isolates Mycobacterium tuberculosis (MTB) and other acid-fast bacilli (AFB) from body fluids such as cerebrospinal fluid (CSF), pleural fluid, pericardial fluid, peritoneal fluid, and synovial fluid using the MGIT (Mycobacterial Growth Indicator Tube) system
    • Diagnoses extrapulmonary tuberculosis (TB) including tuberculous meningitis, TB pleuritis, pericarditis, peritonitis, and arthritis
    • Provides rapid culture-based confirmation of TB suspicion in immunocompromised patients, including those with HIV/AIDS
    • Enables identification of MTB within 2-4 weeks (significantly faster than conventional methods)
    • Allows drug susceptibility testing (DST) and identification of resistant strains
    • Ordered when patients present with clinical signs of extrapulmonary TB such as persistent neurological symptoms, fever with pleural effusion, or joint inflammation
  • Normal Range
    • Normal (Negative) Result: No growth detected in the MGIT medium; indicates absence of viable acid-fast bacilli in the body fluid sample
    • Abnormal (Positive) Result: Growth of mycobacteria detected; indicates presence of viable AFB in the body fluid, confirming active mycobacterial infection
    • Time to Positivity (TTP): Reported in days; typically 2-4 weeks for MTB; earlier positivity may indicate higher bacterial load
    • Units: Qualitative result (Positive/Negative) or quantitative (growth units/CFU estimations when available)
    • Interpretation: Negative results rule out TB in the cultured body fluid site; positive results confirm active mycobacterial infection requiring immediate treatment initiation
  • Interpretation
    • Positive Culture Result:
      • Confirms diagnosis of extrapulmonary TB at the site of fluid collection
      • Speciation (identification of organism) and drug susceptibility testing (DST) will follow to determine antimicrobial resistance patterns
      • Requires immediate initiation or adjustment of anti-TB therapy
      • May indicate disseminated TB, particularly in immunocompromised patients
    • Negative Culture Result:
      • Rules out viable mycobacterial infection in the cultured body fluid; does not exclude TB diagnosis if strong clinical suspicion exists
      • May reflect low bacterial burden, non-viable organisms, or improper specimen handling
      • Clinical correlation with imaging, histopathology, and other diagnostic tests remains essential
    • Early Time to Positivity (TTP < 2 weeks):
      • Suggests high mycobacterial load indicating severe/active infection
      • Associated with worse prognosis in TB meningitis and disseminated TB
    • Factors Affecting Results:
      • Quality and volume of specimen (minimum 1-2 mL recommended; larger volumes increase sensitivity)
      • Proper storage and timely transport to laboratory (ideally within 2 hours)
      • Prior anti-TB therapy may reduce culture sensitivity by inhibiting growth of viable organisms
      • Contamination with other organisms may inhibit mycobacterial growth
      • Immunosuppression status (HIV infection may correlate with bacterial load variations)
    • Clinical Significance:
      • Gold standard for definitive diagnosis of extrapulmonary TB; superior diagnostic accuracy compared to direct microscopy alone
      • MGIT sensitivity ranges from 80-90% depending on specimen type and patient factors
      • Specificity approaches 99% when positive; significantly faster than solid media (Löwenstein-Jensen or Ogawa)
  • Associated Organs
    • Central Nervous System (CNS):
      • CSF culture gold standard for diagnosing tuberculous meningitis (TB meningitis)
      • Most serious form of extrapulmonary TB; high mortality and morbidity if untreated
      • Can result in neurological complications including hydrocephalus, cranial nerve palsies, spinal cord involvement
    • Respiratory System (Pleura):
      • Pleural fluid culture confirms TB pleuritis/pleural effusion
      • Complications include empyema, pleural thickening, restrictive lung disease
    • Cardiovascular System (Pericardium):
      • Pericardial fluid culture diagnoses TB pericarditis
      • Risk of cardiac tamponade, constrictive pericarditis, myocardial involvement, sudden death
    • Gastrointestinal System (Peritoneum):
      • Peritoneal fluid culture confirms TB peritonitis/abdominal TB
      • May lead to intestinal perforation, adhesions, malabsorption, peritoneal fibrosis
    • Musculoskeletal System (Joints):
      • Synovial fluid culture diagnoses TB arthritis/Poncet's disease
      • Complications include joint destruction, ankylosis, functional disability
    • Disseminated TB:
      • Multiple body fluids may be positive indicating miliary TB or hematogenous spread
      • Higher risk in immunocompromised patients (HIV/AIDS, immunosuppressive therapy)
      • Associated with high mortality if untreated or delayed treatment
  • Follow-up Tests
    • When Culture is Positive:
      • Mycobacterial speciation and differentiation (to identify MTB vs. non-tuberculous mycobacteria)
      • Drug susceptibility testing (DST) including first-line drugs (isoniazid, rifampicin) and second-line drugs for MDR/XDR-TB assessment
      • Genotypic resistance detection and molecular line probe assays (for rapid detection of resistance mutations)
      • AFB microscopy of positive culture isolate (acid-fast staining for confirmation)
      • Contact tracing and epidemiological investigation to identify potential transmission sources
    • When Culture is Negative but Clinical Suspicion Remains High:
      • Repeat collection of body fluid specimen (particularly for CSF - repeat lumbar puncture if clinically indicated)
      • AFB microscopy/smear examination with Ziehl-Neelsen or auramine-rhodamine staining
      • Nucleic acid amplification tests (NAATs) such as GeneXpert MTB/RIF for rapid MTB detection and rifampicin resistance
      • Histopathological examination with granuloma identification and AFB staining of biopsied tissue
      • Imaging studies (CT or MRI) based on affected body system
      • TB serology (though less reliable than culture/microscopy)
    • Additional Related Tests:
      • Sputum AFB culture/smear (to assess pulmonary involvement concurrent with extrapulmonary disease)
      • Tuberculin skin test (TST/Mantoux test) or interferon-gamma release assays (IGRAs)
      • HIV testing (essential in extrapulmonary TB to determine immunosuppression level)
      • CD4 count and viral load in HIV-positive patients
      • Inflammatory markers (ESR, CRP) - monitor treatment response and disease activity
    • Monitoring During Treatment:
      • Clinical assessment and symptom monitoring throughout 6-month (standard) or 9-month (MDR-TB) treatment course
      • Repeat body fluid cultures at 2-4 weeks if clinically indicated (may be delayed up to 6-8 weeks in meningitis)
      • Imaging follow-up at 2-3 months to assess response to therapy
      • Hepatic function tests (AST, ALT, bilirubin) if on hepatotoxic anti-TB medications
      • Renal function tests and uric acid levels during treatment
  • Fasting Required?
    • Fasting Requirement: NO - fasting is NOT required for AFB culture by MGIT from body fluids
    • Specimen Collection Procedure:
      • CSF: Collected via lumbar puncture (LP) - sterile, atraumatic procedure; minimum 1-2 mL recommended (preferably 5-10 mL for optimal yield)
      • Pleural Fluid: Collected via thoracentesis - minimum 40-50 mL in sterile container for optimal culture recovery
      • Pericardial Fluid: Collected via pericardiocentesis under ultrasound guidance; 10-50 mL recommended
      • Peritoneal Fluid: Collected via paracentesis; minimum 40-50 mL in sterile container
      • Synovial Fluid: Collected via arthrocentesis under sterile conditions; minimum 2-5 mL required
    • Special Instructions/Patient Preparation:
      • No specific fasting or medication restrictions required
      • Notify physician of any bleeding disorders or anticoagulant therapy (aspirin, warfarin, direct oral anticoagulants) before procedure
      • Empty bladder before procedure (for peritoneal procedures)
      • Maintain sterile technique during collection to prevent contamination
      • Do NOT add formalin or other preservatives - specimen should be processed fresh when possible
      • Transport specimen immediately to laboratory (ideally within 2 hours) at room temperature in sterile container
      • Avoid refrigeration of most body fluids (except CSF which may be refrigerated if delay anticipated)
      • Inform laboratory if patient is on anti-TB therapy (may affect culture results)

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